TODO list
=========

GRASS 7
-------

 * r.li.daemon: Uses UNIX sockets, replace or figure out how
   to use them on Windows
 * r.li.setup: Shell scripts, Tcl/Tk, Xmonitors to be replaced
   by Python + wxPython equivalents.
   See Luca D's prototype in  trunk/gui/wxpython/rlisetup
   and  http://grass.osgeo.org/grass70/manuals/g.gui.rlisetup.html

Brute-force testing
-------------------
# TODO: change to/add 3x3 example

# 7x7 moving window test:
# still Spearfish...

# created as described in EXAMPLES, moving window, in gui/wxgui/rlisetup/g.gui.rlisetup.html:
echo "SAMPLINGFRAME 0|0|1|1
SAMPLEAREA -1|-1|0.015021459227467811|0.011058451816745656
MOVINGWINDOW" > $HOME/.grass7/r.li/movwindow7

export GRASS_OVERWRITE=1
g.region rast=landcover.30m -p
r.mapcalc "forests = if(landcover.30m >= 41 && landcover.30m <= 43,1,null())"

MEASURE="dominance edgedensity mpa mps padcv padrange padsd patchdensity patchnum pielou richness shannon shape simpson"

for mymeasure in $MEASURE ; do
  r.li.${mymeasure} input=forests conf=movwindow7 out=forests_${mymeasure}_mov7
  r.univar forests_${mymeasure}_mov7
done

# also alpha:
r.li.renyi input=forests conf=movwindow7 out=forests_renyi_mov7_a06 alpha=0.6
r.univar forests_renyi_mov7_a06

echo "End of r.li tests"


========================
GRASS 7: North Carolina tests

echo "SAMPLINGFRAME 0|0|1|1
SAMPLEAREA 0.0|0.0|1.0|1.0" > $HOME/.grass7/r.li/landsat_test

g.region rast=lsat7_2002_40 -p
r.li.shannon input=lsat7_2002_40 conf=landsat_test out=landsat_shannon
--> Result written to ASCII file <$HOME/.grass7/r.li/output/landsat_shannon>



===============================================================
GRASS 6
-------

TODO: backport all GRASS 7 fixes

A few remaining things should be done soon:
- add relevant references
- use English variable names in C code

Please change the examples to North Carolina wherever possible:


# Spearfish
g.region rast=landcover.30m -p
r.mapcalc "forests = if(landcover.30m >= 41 && landcover.30m <= 43,1,null())"
d.mon wx0
d.rast forests

# g.gui.rlisetup:
# created as described in EXAMPLES, moving window, in r.li.setup.html:
echo "SAMPLINGFRAME 0|0|1|1
SAMPLEAREA -1|-1|0.015021459227467811|0.011058451816745656
MOVINGWINDOW" > $HOME/.r.li/history/movwindow7

r.li.patchdensity forests conf=movwindow7 out=forests_p_dens7
d.rast.leg forests_p_dens7

r.to.vect forests out=forests feature=area
d.vect forests type=boundary


# MASK test
g.copy rast=fields,MASK
r.li.patchdensity forests conf=movwindow7 out=forests_p_dens7mask --o
d.rast.leg forests_p_dens7mask
# -> no negative values! but MASK is respected

---------

Add example which results in an ASCII output file